Publications

The publications on this page were generated automatically from just identifiers using the Manubot cite utility. For a more complete list, visit Google Scholar.

All

2024

Noninvasive, Multimodal Inflammatory Biomarker Discovery for Systemic Inflammation (NOVA Study): Protocol for a Cross-Sectional Study

Jinjoo Shim, Sinziana Muraru, Rucsandra Dobrota, Elgar Fleisch, Oliver Distler, Filipe Barata

JMIR Research Protocols · 05 Nov 2024 · doi:10.2196/62877

CLAID: Closing the Loop on AI amp; Data Collection A cross-platform transparent computing middleware framework for smart edge-cloud and digital biomarker applications

CLAID: Closing the Loop on AI & Data Collection — A cross-platform transparent computing middleware framework for smart edge-cloud and digital biomarker applications

Patrick Langer, Stephan Altmüller, Elgar Fleisch, Filipe Barata

Future Generation Computer Systems · 01 Oct 2024 · doi:10.1016/j.future.2024.05.026

XGBAge: Prediction and Identification of Factors Influencing Biological Age Using Wearable Accelerometer Data

Jinjoo Shim, Elgar Fleisch, Filipe Barata

2024 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) · 15 Jul 2024 · doi:10.1109/embc53108.2024.10781878

Cough Classification of Unknown Emerging Respiratory Disease with Federated Learning

Mesut Ceylan, Frank Rassouli, Maximilian Boesch, Martin Brutsche, Elgar Fleisch, Filipe Barata

2024 46th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) · 15 Jul 2024 · doi:10.1109/embc53108.2024.10781930

Circadian rhythm analysis using wearable-based accelerometry as a digital biomarker of aging and healthspan

Jinjoo Shim, Elgar Fleisch, Filipe Barata

npj Digital Medicine · 04 Jun 2024 · doi:10.1038/s41746-024-01111-x

The Bitemporal Lens Model—toward a holistic approach to chronic disease prevention with digital biomarkers

Filipe Barata, Jinjoo Shim, Fan Wu, Patrick Langer, Elgar Fleisch

JAMIA Open · 08 Apr 2024 · doi:10.1093/jamiaopen/ooae027

Comparative Efficacy of Commercial Wearables for Circadian Rhythm Home Monitoring from Activity, Heart Rate, and Core Body Temperature

Fan Wu, Patrick Langer, Jinjoo Shim, Elgar Fleisch, Filipe Barata

IEEE Journal of Biomedical and Health Informatics · 01 Jan 2024 · doi:10.1109/jbhi.2024.3471254

2023

Precise Segmentation of U.S. Adults from 24-Hour Wearable-based Physical Activity Profiles Using Machine Learning Clustering

Jinjoo Shim, Elgar Fleisch, Filipe Barata

2023 IEEE 11th International Conference on Healthcare Informatics (ICHI) · 26 Jun 2023 · doi:10.1109/ichi57859.2023.00083

Wearable-based accelerometer activity profile as digital biomarker of inflammation, biological age, and mortality using hierarchical clustering analysis in NHANES 2011–2014

Jinjoo Shim, Elgar Fleisch, Filipe Barata

Scientific Reports · 08 Jun 2023 · doi:10.1038/s41598-023-36062-y

Trends in voice characteristics in patients with heart failure (VENTURE) in Switzerland: Protocol for a longitudinal observational pilot study

Fan Wu, Matthias Nägele, David Cleres, Thomas Haider, Elgar Fleisch, Frank Ruschitzka, Andreas Flammer, Filipe Barata

PLOS ONE · 05 Apr 2023 · doi:10.1371/journal.pone.0283052

Smartphone-based cough monitoring as a near real-time digital pneumonia biomarker

Maximilian Boesch, Frank Rassouli, Florent Baty, Anja Schwärzler, Sandra Widmer, …, Iris Shih, David Cleres, Filipe Barata, Elgar Fleisch, Martin H. Brutsche

ERJ Open Research · 09 Mar 2023 · doi:10.1183/23120541.00518-2022

Nighttime Continuous Contactless Smartphone-Based Cough Monitoring for the Ward: Validation Study

Filipe Barata, David Cleres, Peter Tinschert, Chen-Hsuan Iris Shih, Frank Rassouli, Maximilian Boesch, Martin Brutsche, Elgar Fleisch

JMIR Formative Research · 20 Feb 2023 · doi:10.2196/38439

2022

Automated cough detection in COVID-19 and non-COVID-19 pneumonia using machine learning-based technology

F Rassouli, M Boesch, F Baty, F Barata, D Cleres, P Tinschert, I Shih, E Fleisch, M H Brutsche

10.01 - Respiratory infections and bronchiectasis · 04 Sep 2022 · doi:10.1183/13993003.congress-2022.1219

TripletCough: Cougher Identification and Verification From Contact-Free Smartphone-Based Audio Recordings Using Metric Learning

Stefan Jokic, David Cleres, Frank Rassouli, Claudia Steurer-Stey, Milo A. Puhan, Martin Brutsche, Elgar Fleisch, Filipe Barata

IEEE Journal of Biomedical and Health Informatics · 01 Jun 2022 · doi:10.1109/jbhi.2022.3152944

2021

FLIRT: A feature generation toolkit for wearable data

Simon Föll, Martin Maritsch, Federica Spinola, Varun Mishra, Filipe Barata, Tobias Kowatsch, Elgar Fleisch, Felix Wortmann

Computer Methods and Programs in Biomedicine · 01 Nov 2021 · doi:10.1016/j.cmpb.2021.106461

Smartphone-enabled detection of COugh in COvid-19 (COCO) – preliminary analysis of an exploratory, observational cohort study

Frank Rassouli, Maximilian Boesch, Florent Baty, Peter Tinschert, Filipe Barata, Iris Shih, David Cleres, Elgar Fleisch, Martin H. Brutsche

m-Health/e-health · 05 Sep 2021 · doi:10.1183/13993003.congress-2021.pa3865

Voice-Based Conversational Agents for the Prevention and Management of Chronic and Mental Health Conditions: Systematic Literature Review

Caterina Bérubé, Theresa Schachner, Roman Keller, Elgar Fleisch, Florian v Wangenheim, Filipe Barata, Tobias Kowatsch

Journal of Medical Internet Research · 29 Mar 2021 · doi:10.2196/25933

Conversational Agents as Mediating Social Actors in Chronic Disease Management Involving Health Care Professionals, Patients, and Family Members: Multisite Single-Arm Feasibility Study

Tobias Kowatsch, Theresa Schachner, Samira Harperink, Filipe Barata, Ullrich Dittler, …, Catherine Stanger, Florian v Wangenheim, Elgar Fleisch, Helmut Oswald, Alexander Möller

Journal of Medical Internet Research · 17 Feb 2021 · doi:10.2196/25060

2020

lt;p gt;Nocturnal Cough and Sleep Quality to Assess Asthma Control and Predict Attacks lt; p gt;

<p>Nocturnal Cough and Sleep Quality to Assess Asthma Control and Predict Attacks</p>

Peter Tinschert, Frank Rassouli, Filipe Barata, Claudia Steurer-Stey, Elgar Fleisch, Milo Alan Puhan, Tobias Kowatsch, Martin Hugo Brutsche

Journal of Asthma and Allergy · 01 Dec 2020 · doi:10.2147/JAA.S278155

lt;p gt;Characteristics of Asthma-related Nocturnal Cough: A Potential New Digital Biomarker lt; p gt;

<p>Characteristics of Asthma-related Nocturnal Cough: A Potential New Digital Biomarker</p>

Frank Rassouli, Peter Tinschert, Filipe Barata, Claudia Steurer-Stey, Elgar Fleisch, Milo Alan Puhan, Florent Baty, Tobias Kowatsch, Martin Hugo Brutsche

Journal of Asthma and Allergy · 01 Dec 2020 · doi:10.2147/JAA.S278119

The anatomy of asthma-related nocturnal cough – a potential new digital biomarker

Frank Rassouli, Peter Tinschert, Filipe Barata, Claudia Steurer-Stey, Elgar Fleisch, Milo Puhan, Tobias Kowatsch, Martin H Brutsche

Monitoring airway disease · 07 Sep 2020 · doi:10.1183/13993003.congress-2020.1285

Smartphone-based cough detection predicts asthma control – description of a novel, scalable digital biomarker

Peter Tinschert, Frank Rassouli, Filipe Barata, Claudia Steurer-Stey, Elgar Fleisch, Milo Puhan, Tobias Kowatsch, Martin H. Brutsche

Airway pharmacology and treatment · 07 Sep 2020 · doi:10.1183/13993003.congress-2020.4569

Automatic Recognition, Segmentation, and Sex Assignment of Nocturnal Asthmatic Coughs and Cough Epochs in Smartphone Audio Recordings: Observational Field Study

Filipe Barata, Peter Tinschert, Frank Rassouli, Claudia Steurer-Stey, Elgar Fleisch, Milo Alan Puhan, Martin Brutsche, David Kotz, Tobias Kowatsch

Journal of Medical Internet Research · 14 Jul 2020 · doi:10.2196/18082

2019

Towards Device-Agnostic Mobile Cough Detection with Convolutional Neural Networks

Filipe Barata, Kevin Kipfer, Maurice Weber, Peter Tinschert, Elgar Fleisch, Tobias Kowatsch

2019 IEEE International Conference on Healthcare Informatics (ICHI) · 01 Jun 2019 · doi:10.1109/ICHI.2019.8904554

Prevalence of nocturnal cough in asthma and its potential as a marker for asthma control (MAC) in combination with sleep quality: protocol of a smartphone-based, multicentre, longitudinal observational study with two stages

Peter Tinschert, Frank Rassouli, Filipe Barata, Claudia Steurer-Stey, Elgar Fleisch, Milo Alan Puhan, Martin Brutsche, Tobias Kowatsch

BMJ Open · 01 Jan 2019 · doi:10.1136/bmjopen-2018-026323

2017

The Potential of Mobile Apps for Improving Asthma Self-Management: A Review of Publicly Available and Well-Adopted Asthma Apps

Peter Tinschert, Robert Jakob, Filipe Barata, Jan-Niklas Kramer, Tobias Kowatsch

JMIR mHealth and uHealth · 02 Aug 2017 · doi:10.2196/mhealth.7177

Design and Evaluation of a Mobile Chat App for the Open Source Behavioral Health Intervention Platform MobileCoach

Tobias Kowatsch, Dirk Volland, Iris Shih, Dominik Rüegger, Florian Künzler, …, Björn Brogle, Katrin Heldt, Pauline Gindrat, Nathalie Farpour-Lambert, Dagmar l’Allemand

Lecture Notes in Computer Science · 01 Jan 2017 · doi:10.1007/978-3-319-59144-5_36

2016

Personal MobileCoach

Filipe Barata, Tobias Kowatsch, Peter Tinschert, Andreas Filler

Proceedings of the 2016 ACM International Joint Conference on Pervasive and Ubiquitous Computing: Adjunct · 12 Sep 2016 · doi:10.1145/2968219.2972713